ethoscope
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ethoscope.core package
ethoscope.roi_builder package
ethoscope.trackers package
ethoscope.interactors package
ethoscope.drawers package
ethoscope
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B
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C
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D
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E
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F
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G
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H
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I
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K
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L
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M
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N
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O
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P
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R
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S
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T
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U
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V
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W
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X
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Y
A
AdaptiveBGModel (class in ethoscope.trackers.adaptive_bg_tracker)
AdaptiveBGModelOneObject (class in ethoscope.trackers.single_roi_tracker)
append() (ethoscope.core.data_point.DataPoint method)
apply() (ethoscope.core.roi.ROI method)
(ethoscope.stimulators.stimulators.BaseStimulator method)
AsyncMySQLWriter (class in ethoscope.utils.io)
AsyncSQLiteWriter (class in ethoscope.utils.io)
B
BackgroundModel (class in ethoscope.trackers.adaptive_bg_tracker)
BaseBoolVariable (class in ethoscope.core.variables)
BaseCamera (class in ethoscope.hardware.input.cameras)
BaseDistanceIntVar (class in ethoscope.core.variables)
BaseDrawer (class in ethoscope.drawers.drawers)
BaseInterface (class in ethoscope.hardware.interfaces.interfaces)
BaseIntVariable (class in ethoscope.core.variables)
BaseRelativeVariable (class in ethoscope.core.variables)
BaseROIBuilder (class in ethoscope.roi_builders.roi_builders)
BaseStimulator (class in ethoscope.stimulators.stimulators)
BaseTracker (class in ethoscope.trackers.trackers)
bg_img (ethoscope.trackers.adaptive_bg_tracker.BackgroundModel attribute)
bind_tracker() (ethoscope.stimulators.sleep_depriver_stimulators.ExperimentalSleepDepStimulator method)
(ethoscope.stimulators.stimulators.BaseStimulator method)
bounding_rect() (ethoscope.core.roi.ROI method)
build() (ethoscope.roi_builders.roi_builders.BaseROIBuilder method)
C
capture (ethoscope.hardware.input.cameras.BaseCamera attribute)
close() (ethoscope.utils.io.ResultWriter method)
compute_features() (ethoscope.trackers.adaptive_bg_tracker.ObjectModel method)
ControlThread (class in ethoscope.web_utils.control_thread)
ControlThreadVideoRecording (class in ethoscope.web_utils.record)
copy() (ethoscope.core.data_point.DataPoint method)
cpu_serial() (in module ethoscope.web_utils.helpers)
D
DAMFileHelper (class in ethoscope.utils.io)
DataPoint (class in ethoscope.core.data_point)
decrease_learning_rate() (ethoscope.trackers.adaptive_bg_tracker.BackgroundModel method)
DefaultDrawer (class in ethoscope.drawers.drawers)
DefaultInterface (class in ethoscope.hardware.interfaces.interfaces)
DefaultROIBuilder (class in ethoscope.roi_builders.roi_builders)
DefaultStimulator (class in ethoscope.stimulators.stimulators)
DescribedObject (class in ethoscope.utils.description)
description (ethoscope.utils.description.DescribedObject attribute)
distance() (ethoscope.trackers.adaptive_bg_tracker.ObjectModel method)
draw() (ethoscope.drawers.drawers.BaseDrawer method)
DummyFrameGrabber (class in ethoscope.hardware.input.cameras)
DummyPiCameraAsync (class in ethoscope.hardware.input.cameras)
DynamicOdourDeliverer (class in ethoscope.stimulators.odour_stimulators)
DynamicOdourSleepDepriver (class in ethoscope.stimulators.odour_stimulators)
E
ethoscope (module)
,
[1]
ethoscope.core (module)
ethoscope.core.data_point (module)
ethoscope.core.monitor (module)
ethoscope.core.roi (module)
ethoscope.core.tracking_unit (module)
ethoscope.core.variables (module)
ethoscope.drawers (module)
ethoscope.drawers.drawers (module)
ethoscope.hardware (module)
ethoscope.hardware.input (module)
ethoscope.hardware.input.cameras (module)
ethoscope.hardware.interfaces (module)
ethoscope.hardware.interfaces.interfaces (module)
ethoscope.hardware.interfaces.sleep_depriver_interface (module)
ethoscope.roi_builders (module)
ethoscope.roi_builders.img_roi_builder (module)
ethoscope.roi_builders.roi_builders (module)
ethoscope.roi_builders.target_roi_builder (module)
ethoscope.stimulators (module)
ethoscope.stimulators.odour_stimulators (module)
ethoscope.stimulators.sleep_depriver_stimulators (module)
ethoscope.stimulators.stimulators (module)
ethoscope.trackers (module)
ethoscope.trackers.adaptive_bg_tracker (module)
ethoscope.trackers.single_roi_tracker (module)
ethoscope.trackers.trackers (module)
ethoscope.utils (module)
ethoscope.utils.debug (module)
ethoscope.utils.description (module)
ethoscope.utils.img_proc (module)
ethoscope.utils.io (module)
ethoscope.web_utils (module)
ethoscope.web_utils.control_thread (module)
ethoscope.web_utils.helpers (module)
ethoscope.web_utils.record (module)
EthoscopeException
ExperimentalInformations (class in ethoscope.web_utils.control_thread)
ExperimentalSleepDepStimulator (class in ethoscope.stimulators.sleep_depriver_stimulators)
F
features_header (ethoscope.trackers.adaptive_bg_tracker.ObjectModel attribute)
fg_model (ethoscope.trackers.adaptive_bg_tracker.AdaptiveBGModel attribute)
file_in_dir_r() (in module ethoscope.web_utils.helpers)
flush() (ethoscope.utils.io.DAMFileHelper method)
(ethoscope.utils.io.ImgToMySQLHelper method)
(ethoscope.utils.io.ResultWriter method)
functional_type (ethoscope.core.variables.BaseBoolVariable attribute)
(ethoscope.core.variables.BaseDistanceIntVar attribute)
(ethoscope.core.variables.BaseIntVariable attribute)
(ethoscope.core.variables.Label attribute)
(ethoscope.core.variables.PhiVariable attribute)
(ethoscope.core.variables.XYDistance attribute)
(ethoscope.core.variables.mLogLik attribute)
(ethoscope.stimulators.stimulators.HasInteractedVariable attribute)
G
GeneralVideoRecorder (class in ethoscope.web_utils.record)
get_commit_version() (in module ethoscope.web_utils.helpers)
get_feature_dict() (ethoscope.core.roi.ROI method)
get_last_positions() (ethoscope.core.tracking_unit.TrackingUnit method)
get_machine_info() (in module ethoscope.web_utils.helpers)
get_version() (in module ethoscope.web_utils.helpers)
H
HardwareConnection (class in ethoscope.hardware.interfaces.interfaces)
HasChangedSideStimulator (class in ethoscope.stimulators.odour_stimulators)
HasInteractedVariable (class in ethoscope.stimulators.stimulators)
HD12TubesRoiBuilder (class in ethoscope.roi_builders.target_roi_builder)
HDVideoRecorder (class in ethoscope.web_utils.record)
header_name (ethoscope.core.variables.BaseIntVariable attribute)
(ethoscope.core.variables.HeightVariable attribute)
(ethoscope.core.variables.IsInferredVariable attribute)
(ethoscope.core.variables.Label attribute)
(ethoscope.core.variables.PhiVariable attribute)
(ethoscope.core.variables.WidthVariable attribute)
(ethoscope.core.variables.XPosVariable attribute)
(ethoscope.core.variables.XYDistance attribute)
(ethoscope.core.variables.YPosVariable attribute)
(ethoscope.core.variables.mLogLik attribute)
(ethoscope.stimulators.stimulators.HasInteractedVariable attribute)
height (ethoscope.hardware.input.cameras.BaseCamera attribute)
HeightVariable (class in ethoscope.core.variables)
I
idx (ethoscope.core.roi.ROI attribute)
ImgMaskROIBuilder (class in ethoscope.roi_builders.img_roi_builder)
ImgToMySQLHelper (class in ethoscope.utils.io)
increase_learning_rate() (ethoscope.trackers.adaptive_bg_tracker.BackgroundModel method)
info (ethoscope.web_utils.control_thread.ControlThread attribute)
info_dic (ethoscope.web_utils.control_thread.ExperimentalInformations attribute)
input_roi_data() (ethoscope.utils.io.DAMFileHelper method)
is_last_frame() (ethoscope.hardware.input.cameras.BaseCamera method)
(ethoscope.hardware.input.cameras.MovieVirtualCamera method)
(ethoscope.hardware.input.cameras.OurPiCameraAsync method)
(ethoscope.hardware.input.cameras.V4L2Camera method)
is_opened() (ethoscope.hardware.input.cameras.BaseCamera method)
(ethoscope.hardware.input.cameras.MovieVirtualCamera method)
(ethoscope.hardware.input.cameras.OurPiCameraAsync method)
(ethoscope.hardware.input.cameras.V4L2Camera method)
is_ready (ethoscope.trackers.adaptive_bg_tracker.ObjectModel attribute)
IsInferredVariable (class in ethoscope.core.variables)
isMachinePI() (in module ethoscope.web_utils.helpers)
IsMovingStimulator (class in ethoscope.stimulators.sleep_depriver_stimulators)
K
k (ethoscope.web_utils.control_thread.ControlThread attribute)
(ethoscope.web_utils.record.ControlThreadVideoRecording attribute)
L
Label (class in ethoscope.core.variables)
last_drawn_frame (ethoscope.drawers.drawers.BaseDrawer attribute)
last_frame_idx (ethoscope.core.monitor.Monitor attribute)
last_positions (ethoscope.core.monitor.Monitor attribute)
last_time_point (ethoscope.trackers.trackers.BaseTracker attribute)
last_time_stamp (ethoscope.core.monitor.Monitor attribute)
longest_axis (ethoscope.core.roi.ROI attribute)
M
make_dam_file_sql_fields() (ethoscope.utils.io.DAMFileHelper method)
mask() (ethoscope.core.roi.ROI method)
merge_blobs() (in module ethoscope.utils.img_proc)
metadata (ethoscope.utils.io.ResultWriter attribute)
MiddleCrossingOdourStimulator (class in ethoscope.stimulators.odour_stimulators)
MiddleCrossingStimulator (class in ethoscope.stimulators.sleep_depriver_stimulators)
mLogLik (class in ethoscope.core.variables)
Monitor (class in ethoscope.core.monitor)
MovieVirtualCamera (class in ethoscope.hardware.input.cameras)
N
NoPositionError
Null (class in ethoscope.utils.io)
NullDrawer (class in ethoscope.drawers.drawers)
O
ObjectModel (class in ethoscope.trackers.adaptive_bg_tracker)
offset (ethoscope.core.roi.ROI attribute)
OlfactionAssayROIBuilder (class in ethoscope.roi_builders.target_roi_builder)
OptomotorSleepDepriver (class in ethoscope.stimulators.sleep_depriver_stimulators)
OurPiCameraAsync (class in ethoscope.hardware.input.cameras)
P
path (ethoscope.hardware.input.cameras.MovieVirtualCamera attribute)
PhiVariable (class in ethoscope.core.variables)
pi_version() (in module ethoscope.web_utils.helpers)
PiCameraProcess (class in ethoscope.web_utils.record)
PiFrameGrabber (class in ethoscope.hardware.input.cameras)
polygon (ethoscope.core.roi.ROI attribute)
positions (ethoscope.trackers.trackers.BaseTracker attribute)
R
rectangle (ethoscope.core.roi.ROI attribute)
resolution (ethoscope.hardware.input.cameras.BaseCamera attribute)
restart() (ethoscope.hardware.input.cameras.BaseCamera method)
(ethoscope.hardware.input.cameras.MovieVirtualCamera method)
(ethoscope.hardware.input.cameras.OurPiCameraAsync method)
(ethoscope.hardware.input.cameras.V4L2Camera method)
ResultWriter (class in ethoscope.utils.io)
ROI (class in ethoscope.core.roi)
roi (ethoscope.core.tracking_unit.TrackingUnit attribute)
run() (ethoscope.core.monitor.Monitor method)
(ethoscope.hardware.input.cameras.DummyFrameGrabber method)
(ethoscope.hardware.input.cameras.PiFrameGrabber method)
(ethoscope.hardware.interfaces.interfaces.HardwareConnection method)
(ethoscope.utils.io.AsyncMySQLWriter method)
(ethoscope.utils.io.AsyncSQLiteWriter method)
(ethoscope.web_utils.control_thread.ControlThread method)
(ethoscope.web_utils.record.ControlThreadVideoRecording method)
(ethoscope.web_utils.record.GeneralVideoRecorder method)
(ethoscope.web_utils.record.PiCameraProcess method)
S
send() (ethoscope.hardware.interfaces.interfaces.BaseInterface method)
(ethoscope.hardware.interfaces.interfaces.DefaultInterface method)
(ethoscope.hardware.interfaces.sleep_depriver_interface.SleepDepriverInterface method)
(ethoscope.hardware.interfaces.sleep_depriver_interface.SleepDepriverInterfaceCR method)
send_instruction() (ethoscope.hardware.interfaces.interfaces.HardwareConnection method)
set_evanescent() (ethoscope.web_utils.control_thread.ControlThread method)
set_value() (ethoscope.core.roi.ROI method)
show() (in module ethoscope.utils.debug)
SleepDepriverInterface (class in ethoscope.hardware.interfaces.sleep_depriver_interface)
SleepDepriverInterfaceCR (class in ethoscope.hardware.interfaces.sleep_depriver_interface)
SleepDepStimulator (class in ethoscope.stimulators.sleep_depriver_stimulators)
SleepDepStimulatorCR (class in ethoscope.stimulators.sleep_depriver_stimulators)
SleepMonitorWithTargetROIBuilder (class in ethoscope.roi_builders.target_roi_builder)
sql_data_type (ethoscope.core.variables.BaseBoolVariable attribute)
(ethoscope.core.variables.BaseIntVariable attribute)
SQLiteResultWriter (class in ethoscope.utils.io)
StandardVideoRecorder (class in ethoscope.web_utils.record)
start_time (ethoscope.hardware.input.cameras.MovieVirtualCamera attribute)
(ethoscope.hardware.input.cameras.OurPiCameraAsync attribute)
(ethoscope.hardware.input.cameras.V4L2Camera attribute)
stimulator (ethoscope.core.tracking_unit.TrackingUnit attribute)
stop() (ethoscope.core.monitor.Monitor method)
(ethoscope.hardware.interfaces.interfaces.HardwareConnection method)
(ethoscope.web_utils.control_thread.ControlThread method)
(ethoscope.web_utils.record.ControlThreadVideoRecording method)
(ethoscope.web_utils.record.GeneralVideoRecorder method)
T
TargetGridROIBuilder (class in ethoscope.roi_builders.target_roi_builder)
times (ethoscope.trackers.trackers.BaseTracker attribute)
to_absolute() (ethoscope.core.variables.BaseRelativeVariable method)
track() (ethoscope.core.tracking_unit.TrackingUnit method)
(ethoscope.trackers.trackers.BaseTracker method)
TrackingUnit (class in ethoscope.core.tracking_unit)
U
update() (ethoscope.trackers.adaptive_bg_tracker.BackgroundModel method)
(ethoscope.trackers.adaptive_bg_tracker.ObjectModel method)
user_options() (ethoscope.web_utils.control_thread.ControlThread class method)
V
V4L2Camera (class in ethoscope.hardware.input.cameras)
value (ethoscope.core.roi.ROI attribute)
W
was_interrupted (ethoscope.web_utils.control_thread.ControlThread attribute)
width (ethoscope.hardware.input.cameras.BaseCamera attribute)
WidthVariable (class in ethoscope.core.variables)
write() (ethoscope.utils.io.ResultWriter method)
X
XPosVariable (class in ethoscope.core.variables)
xy_pos() (ethoscope.trackers.trackers.BaseTracker method)
XYDistance (class in ethoscope.core.variables)
Y
YPosVariable (class in ethoscope.core.variables)
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